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Task 22284094

Task 22284094

Name oifs_43r3_ps_0375_2012050100_123_981_12198019_0
Workunit 12198019
Created 24 Dec 2022, 4:48:17 UTC
Sent 16 Jan 2023, 14:18:56 UTC
Report deadline 17 Mar 2023, 14:18:56 UTC
Received 16 Jan 2023, 15:19:41 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 5 (0x00000005) Unknown error code
Computer ID 1541555
Run time 26 min 23 sec
CPU time 26 min 16 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 1.00 GFLOPS
Application version OpenIFS 43r3 Perturbed Surface v1.05
x86_64-pc-linux-gnu
Peak working set size 4,410.58 MB
Peak swap size 4,974.13 MB
Peak disk usage 1,206.75 MB
Stderr
<core_client_version>7.18.1</core_client_version>
<![CDATA[
<message>
process exited with code 5 (0x5, -251)</message>
<stderr_txt>
(argv0) ../../projects/climateprediction.net/oifs_43r3_ps_1.05_x86_64-pc-linux-gnu
(argv1) start_date: 2012050100
(argv2) exptid: hq0f
(argv3) unique_member_id: 0375
(argv4) batchid: 981
(argv5) wuid: 12198019
(argv6) fclen: 123
(argv7) app_name: oifs_43r3_ps
(argv8) nthreads: 1
Working directory is: /var/lib/boinc-client/slots/9
Project directory is: /var/lib/boinc-client/projects/climateprediction.net/
app name: oifs_43r3_ps
version: 1.05
Location of temp folder: /var/lib/boinc-client/projects/climateprediction.net/oifs_43r3_ps_12198019
Copying: /var/lib/boinc-client/projects/climateprediction.net/oifs_43r3_ps_app_1.05_x86_64-pc-linux-gnu.zip to: /var/lib/boinc-client/slots/9/oifs_43r3_ps_app_1.05_x86_64-pc-linux-gnu.zip
Unzipping the app zip file: /var/lib/boinc-client/slots/9/oifs_43r3_ps_app_1.05_x86_64-pc-linux-gnu.zip
Copying the namelist files from: ../../projects/climateprediction.net/jf_546a91f9c8b0bc10f20fb9319956ba54 to: /var/lib/boinc-client/slots/9/oifs_43r3_ps_0375_2012050100_123_981_12198019.zip
Unzipping the namelist zip file: /var/lib/boinc-client/slots/9/oifs_43r3_ps_0375_2012050100_123_981_12198019.zip
ic_ancil_file: ic_ancil_12198019
ifsdata_file: ifsdata_12198019
climate_data_file: clim_data_12198019
horiz_resolution: 159
vert_resolution: 60
grid_type: l_2
upload_interval: 24
utstep: 3600
nfrres: restart dump frequency (steps) 24
Copying IC ancils from: ../../projects/climateprediction.net/jf_cedad8d1f3193a3d4a7ed47ac1d5c413 to: /var/lib/boinc-client/slots/9/ic_ancil_12198019.zip
Unzipping the IC ancils zip file: /var/lib/boinc-client/slots/9/ic_ancil_12198019.zip
Copying the ifsdata_file from: ../../projects/climateprediction.net/jf_9486f0dfeba93124b936bc6f03580de8 to: /var/lib/boinc-client/slots/9/ifsdata/ifsdata_12198019.zip
Unzipping the ifsdata_zip file: /var/lib/boinc-client/slots/9/ifsdata/ifsdata_12198019.zip
Copying the climate data file from: ../../projects/climateprediction.net/jf_f32c668cf7829426ffd94699b48b9a2e to: /var/lib/boinc-client/slots/9/159l_2/clim_data_12198019.zip
Unzipping the climate data zip file: /var/lib/boinc-client/slots/9/159l_2/clim_data_12198019.zip
Checking for progress XML file: /var/lib/boinc-client/slots/9/progress_file_12198019.xml
Creating progress file: /var/lib/boinc-client/slots/9/progress_file_12198019.xml
last_cpu_time: 0
upload_file_number: 0
last_iter: 0
last_upload: 0
model_completed: 0
total_length_of_simulation: 10627200
result_base_name: oifs_43r3_ps_0375_2012050100_123_981_12198019_0_r1566447713
The child process has been launched with process id: 1586703
Executing the command: /var/lib/boinc-client/slots/9/oifs_43r3_model.exe
[EC_DRHOOK:hostname:myproc:omptid:pid:unixtid] [YYYYMMDD:HHMMSS:epoch:walltime] [function@file:lineno] -- Max OpenMP threads = 1
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2091] fp = 0x3129fe0
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2098] DR_HOOK_ALLOW_COREDUMP=-1
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2104] Hardlimit for core file is now 0 (0x0)
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2122] DR_HOOK_PROFILE_PROC=-1
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2128] DR_HOOK_PROFILE_LIMIT=-10.000
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2194] DR_HOOK_RANDOM_MEMSTAT=0  (RAND_MAX=2147483647)
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2205] DR_HOOK_HASHBITS=16
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2213] DR_HOOK_NCALLSTACK=0
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2221] DR_HOOK_HARAKIRI_TIMEOUT=500
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2228] DR_HOOK_TRAPFPE=1
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2235] DR_HOOK_TRAPFPE_INVALID=1
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2242] DR_HOOK_TRAPFPE_DIVBYZERO=1
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2249] DR_HOOK_TRAPFPE_OVERFLOW=1
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.000] [ignore_signals@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1227] DR_HOOK_IGNORE_SIGNALS=<undef>
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.000] [restore_default_signals@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1178] DR_HOOK_RESTORE_DEFAULT_SIGNALS=<undef>
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.000] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1937] New signal handler 'signal_drhook' for signal#6 (SIGABRT) at 0x81f820 (old at 0x1ce8bb0)
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.001] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1938] New signal handler 'signal_drhook' for signal#7 (SIGBUS) at 0x81f820 (old at (nil))
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.001] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1939] New signal handler 'signal_drhook' for signal#11 (SIGSEGV) at 0x81f820 (old at 0x1ce8bb0)
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.001] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1944] New signal handler 'signal_drhook' for signal#16 (SIGSTKFLT) at 0x81f820 (old at (nil))
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.001] [trapfpe_treatment@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1149] DR_HOOK enables SIGFPE-related floating point trapping since DRHOOK_TRAPFPE=1
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.001] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1948] New signal handler 'signal_drhook' for signal#8 (SIGFPE) at 0x81f820 (old at 0x1ce8bb0)
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.001] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1949] New signal handler 'signal_drhook' for signal#4 (SIGILL) at 0x81f820 (old at 0x1ce8bb0)
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.001] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1951] New signal handler 'signal_drhook' for signal#5 (SIGTRAP) at 0x81f820 (old at (nil))
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.001] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1952] New signal handler 'signal_drhook' for signal#2 (SIGINT) at 0x81f820 (old at 0x1ce8bb0)
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.001] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1960] New signal handler 'signal_drhook' for signal#3 (SIGQUIT) at 0x81f820 (old at 0x1ce8bb0)
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.001] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1961] New signal handler 'signal_drhook' for signal#15 (SIGTERM) at 0x81f820 (old at 0x1ce8bb0)
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.001] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1966] New signal handler 'signal_drhook' for signal#24 (SIGXCPU) at 0x81f820 (old at (nil))
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.001] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1968] New signal handler 'signal_drhook' for signal#25 (SIGXFSZ) at 0x81f820 (old at (nil))
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.001] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1973] New signal handler 'signal_drhook' for signal#31 (SIGSYS) at 0x81f820 (old at (nil))
[EC_DRHOOK:l-hawkeye:1:1:1586703:1586703] [20230116:062110:1673878870:0.001] [catch_signals@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1111] DR_HOOK_CATCH_SIGNALS=<undef>
  06:22:07 STEP    0 H=   0:00 +CPU= 52.293
Moving to projects directory: /var/lib/boinc-client/slots/9/ICMGGhq0f+000000
Moving to projects directory: /var/lib/boinc-client/slots/9/ICMSHhq0f+000000
Moving to projects directory: /var/lib/boinc-client/slots/9/ICMUAhq0f+000000
  06:22:36 STEP    1 H=   1:00 +CPU= 28.930
  06:23:08 STEP    2 H=   2:00 +CPU= 32.294
  06:23:47 STEP    3 H=   3:00 +CPU= 38.866
  06:24:12 STEP    4 H=   4:00 +CPU= 25.108
  06:24:36 STEP    5 H=   5:00 +CPU= 24.454
  06:25:16 STEP    6 H=   6:00 +CPU= 39.423
  06:25:40 STEP    7 H=   7:00 +CPU= 24.329
  06:26:05 STEP    8 H=   8:00 +CPU= 25.245
  06:26:44 STEP    9 H=   9:00 +CPU= 38.306
  06:27:11 STEP   10 H=  10:00 +CPU= 26.856
  06:27:36 STEP   11 H=  11:00 +CPU= 24.965
  06:28:18 STEP   12 H=  12:00 +CPU= 42.432
Moving to projects directory: /var/lib/boinc-client/slots/9/ICMGGhq0f+000012
Moving to projects directory: /var/lib/boinc-client/slots/9/ICMSHhq0f+000012
Moving to projects directory: /var/lib/boinc-client/slots/9/ICMUAhq0f+000012
  06:28:43 STEP   13 H=  13:00 +CPU= 24.496
  06:29:08 STEP   14 H=  14:00 +CPU= 25.116
  06:29:46 STEP   15 H=  15:00 +CPU= 38.216
  06:30:11 STEP   16 H=  16:00 +CPU= 25.134
  06:30:35 STEP   17 H=  17:00 +CPU= 24.407
  06:31:15 STEP   18 H=  18:00 +CPU= 39.262
  06:31:39 STEP   19 H=  19:00 +CPU= 24.345
  06:32:04 STEP   20 H=  20:00 +CPU= 25.094
  06:32:43 STEP   21 H=  21:00 +CPU= 38.415
  06:33:08 STEP   22 H=  22:00 +CPU= 25.189
  06:33:33 STEP   23 H=  23:00 +CPU= 25.025
  06:34:18 STEP   24 H=  24:00 +CPU= 45.648
Moving to projects directory: /var/lib/boinc-client/slots/9/ICMGGhq0f+000024
Moving to projects directory: /var/lib/boinc-client/slots/9/ICMSHhq0f+000024
Moving to projects directory: /var/lib/boinc-client/slots/9/ICMUAhq0f+000024
Adding to the zip: /var/lib/boinc-client/projects/climateprediction.net/oifs_43r3_ps_12198019/ICMGGhq0f+000000
Adding to the zip: /var/lib/boinc-client/projects/climateprediction.net/oifs_43r3_ps_12198019/ICMSHhq0f+000000
Adding to the zip: /var/lib/boinc-client/projects/climateprediction.net/oifs_43r3_ps_12198019/ICMUAhq0f+000000
Adding to the zip: /var/lib/boinc-client/projects/climateprediction.net/oifs_43r3_ps_12198019/ICMGGhq0f+000012
Adding to the zip: /var/lib/boinc-client/projects/climateprediction.net/oifs_43r3_ps_12198019/ICMSHhq0f+000012
Adding to the zip: /var/lib/boinc-client/projects/climateprediction.net/oifs_43r3_ps_12198019/ICMUAhq0f+000012
Zipping up the intermediate file: /var/lib/boinc-client/projects/climateprediction.net/oifs_43r3_ps_0375_2012050100_123_981_12198019_0_r1566447713_0.zip
Uploading the intermediate file: upload_file_0.zip
  06:34:43 STEP   25 H=  25:00 +CPU= 24.404
  06:35:08 STEP   26 H=  26:00 +CPU= 25.107
  06:35:47 STEP   27 H=  27:00 +CPU= 38.540
  06:36:12 STEP   28 H=  28:00 +CPU= 25.176
  06:36:36 STEP   29 H=  29:00 +CPU= 24.501
  06:37:16 STEP   30 H=  30:00 +CPU= 39.914
  06:37:41 STEP   31 H=  31:00 +CPU= 24.414
  06:38:06 STEP   32 H=  32:00 +CPU= 25.113
  06:38:44 STEP   33 H=  33:00 +CPU= 38.495
  06:39:09 STEP   34 H=  34:00 +CPU= 25.110
  06:39:34 STEP   35 H=  35:00 +CPU= 24.394
  06:40:16 STEP   36 H=  36:00 +CPU= 42.742
Moving to projects directory: /var/lib/boinc-client/slots/9/ICMGGhq0f+000036
Moving to projects directory: /var/lib/boinc-client/slots/9/ICMSHhq0f+000036
Moving to projects directory: /var/lib/boinc-client/slots/9/ICMUAhq0f+000036
  06:40:42 STEP   37 H=  37:00 +CPU= 26.062
  06:41:08 STEP   38 H=  38:00 +CPU= 25.085
  06:41:46 STEP   39 H=  39:00 +CPU= 38.192
  06:42:11 STEP   40 H=  40:00 +CPU= 24.966
  06:42:35 STEP   41 H=  41:00 +CPU= 24.324
  06:43:14 STEP   42 H=  42:00 +CPU= 38.872
  06:43:38 STEP   43 H=  43:00 +CPU= 24.221
  06:44:03 STEP   44 H=  44:00 +CPU= 24.871
  06:44:41 STEP   45 H=  45:00 +CPU= 38.148
  06:45:06 STEP   46 H=  46:00 +CPU= 25.019
  06:45:31 STEP   47 H=  47:00 +CPU= 25.009
  06:46:17 STEP   48 H=  48:00 +CPU= 45.490
Moving to projects directory: /var/lib/boinc-client/slots/9/ICMGGhq0f+000048
Moving to projects directory: /var/lib/boinc-client/slots/9/ICMSHhq0f+000048
Moving to projects directory: /var/lib/boinc-client/slots/9/ICMUAhq0f+000048
Adding to the zip: /var/lib/boinc-client/projects/climateprediction.net/oifs_43r3_ps_12198019/ICMGGhq0f+000024
Adding to the zip: /var/lib/boinc-client/projects/climateprediction.net/oifs_43r3_ps_12198019/ICMSHhq0f+000024
Adding to the zip: /var/lib/boinc-client/projects/climateprediction.net/oifs_43r3_ps_12198019/ICMUAhq0f+000024
Adding to the zip: /var/lib/boinc-client/projects/climateprediction.net/oifs_43r3_ps_12198019/ICMGGhq0f+000036
Adding to the zip: /var/lib/boinc-client/projects/climateprediction.net/oifs_43r3_ps_12198019/ICMSHhq0f+000036
Adding to the zip: /var/lib/boinc-client/projects/climateprediction.net/oifs_43r3_ps_12198019/ICMUAhq0f+000036
Zipping up the intermediate file: /var/lib/boinc-client/projects/climateprediction.net/oifs_43r3_ps_0375_2012050100_123_981_12198019_0_r1566447713_1.zip
Uploading the intermediate file: upload_file_1.zip
  06:46:41 STEP   49 H=  49:00 +CPU= 24.241
  06:47:06 STEP   50 H=  50:00 +CPU= 24.973
free(): invalid pointer
double free or corruption (out)

</stderr_txt>
]]>
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